Amino Acid Catabolism

Protein and AA Metabolism
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major role of dietary protein is to replace body protein
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​protein is digested to amino acids (AA) which are a source of​
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essential (EAA)​
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non-essential (NEAA)
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body is constantly degrading and synthesizing and replacing its proteins
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new proteins are synthesized from
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"old" AA from protein breakdown​
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"new" AA from dietary protein
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amount of protein in adults is relatively fixed
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loss can be due to illness or sarcopenia​
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gain with training
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each day we lose the same about of nitrogen that we take in
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N in = N out (N balance)​
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presence of N is what makes protein different from CHO and fat
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the skeleton is a source of C,H and O for the TCA cycle
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energy source is proteins secondary role
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must remove the NH2 group​
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transamination
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transfers NH3​
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deamination​
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removes NH3​
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AA transaminates to glutamate
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remaining C skeleton used in metabolism
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Transamination
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transfer of amino group from an AA to a keto acid, produces a new AA and a new keto acid
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this process allows for the synthesis of NEAA from keto acids​
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the production of keto acids are used for energy needs and gluconeogenesis)
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the most active aminotransferases are:
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alanine aminotransferase (ALT)​
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in serum used as clinical indication of myocardial infarction, myocardial damage​
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aspartate aminotransferase (AST)
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in serum used as a clinical indication of liver damage​
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used to monitor patients on drugs that might damage liver
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after the NH2 is removed, the carbon skeletons enter metabolic pathways
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pyruvate --> acetyl CoA or OAA​
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OAA --> TCA
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α-KG --> TCA
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other AA carbon skeletons enter at acetyl CoA directly
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energy derived from these C skeletons is derived from the processes of TCA and ETS
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transamination is also the means for disposing excess AA
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also means using body's own protein for fuel
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Deamination & Urea Cycle

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Removal of nitrogen via urea cycle
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NH4 cannot be free in cells as it is toxic​
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processed in the liver by urea cycle
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urea is non toxic​
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carbamoyl-p enters urea cycle like acetyl CoA enters TCA (by combining with the last compound in the cycle)
1. carbamoyl-P + ornithin --> citrulline
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so far only 1 N is involved
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we are still in the mito​
2. citrulline + aspartate --> argininosuccinate
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citrulline leaves mito and goes to cytosol
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we added one more N (aspartate is the N donor)
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requires input of ATP
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occurs in the cytosol
3. argininosuccinate --> arginine + succinate --> fumarate (TCA)
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succinate comes off and is converted to fumarate
4. arginine + H2O --> ornithine (urea made from this step)
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cycle begins again with another NH4



